PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.Q9PAY
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family G2-like
Protein Properties Length: 391aa    MW: 43319.2 Da    PI: 8.7997
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.Q9PAYgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like87.99.6e-28128182156
      G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                  k +++WtpeLH+rFv+aveqL G +kA+P++ile+m++++Lt+++++SHLQkYR++
  Araip.Q9PAY 128 KVKVDWTPELHRRFVQAVEQL-GVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSH 182
                  5689*****************.********************************86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129417.773125184IPR017930Myb domain
SuperFamilySSF466893.4E-18126185IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.9E-26127185IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-26128182IPR006447Myb domain, plants
PfamPF002491.2E-7131180IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007165Biological Processsignal transduction
GO:0009658Biological Processchloroplast organization
GO:0009910Biological Processnegative regulation of flower development
GO:0010380Biological Processregulation of chlorophyll biosynthetic process
GO:0010638Biological Processpositive regulation of organelle organization
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    Send to blast
MLGVSSPPVG STRRDERMES FKSIGVSSKD DEFGELSEGS LLESINFDDL FVGINMESDV  60
LPDLEMEADV FAQFFDNPKA DQSSIHNKLA SNKNEESMVV NPPTKYAGKG RKPSSKSKSN  120
NPQAKIKKVK VDWTPELHRR FVQAVEQLGV DKAVPSRILE IMGIDCLTRH NIASHLQKYR  180
SHRKHLLARE AEAANWNQRR QMYGGKRDVS SPWLAPTMGF PPITSVHHFR PLHVWGHPSM  240
DQSFIHTWPK NPTHSLSQSQ PWVQPVALPF WHPHHQLAQN MLTPGSPCFP QPLTTRKYGS  300
GGVAGTIIPV TSPHPHVMYK AADPPINGLS SANPNPIIDF HPSKESIDAA IGDVLSKPWQ  360
PLPLGLKAPA LDSVLTELQR QGISNIPPSC A
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A1e-15127180457ARR10-B
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00022PBMTransfer from AT2G20570Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016188211.10.0PREDICTED: transcription activator GLK1-like isoform X1
SwissprotQ9SIV32e-82GLK1_ARATH; Transcription activator GLK1
TrEMBLA0A151SET71e-149A0A151SET7_CAJCA; Two-component response regulator-like APRR2
STRINGGLYMA13G37010.11e-146(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF42423461
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20570.19e-81GBF's pro-rich region-interacting factor 1